BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025H08LP1|AL428460
(868 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1305 1660 0.0
>3x_Contig1305
Length = 9229
Score = 1660 bits (836), Expect = 0.0
Identities = 859/868 (98%)
Strand = Plus / Plus
Query: 1 atccatttcttcctattgggttcggtgctgtgcttaggatgcagcagctttttccattgc 60
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 499 atccatgtcttcctattgggtccggtgctgtgcttaggatgcagcagctttttccattgc 558
Query: 61 ttaaagcagcactccgaatcgcattgtcatatctggtctaaagtggactacatgggaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ttaaagcagcactccgaatcgcattgtcatatctggtctaaagtggactacatgggaatc 618
Query: 121 attattatgattacgtgttccattatctcattgttatactatggattccacgaccacatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 attattatgattacgtgttccattatctcattgttatactatggattccacgaccacatt 678
Query: 181 ttccatttcaaatgtttcaccgtattcaccgttattctgggaactatctgcactgtgttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ttccatttcaaatgtttcaccgtattcaccgttattctgggaactatctgcactgtgttt 738
Query: 241 gcactacacgacaaatttaactcaaagacttttagacccttcagagcaatgttttacgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 gcactacacgacaaatttaactcaaagacttttagacccttcagagcaatgttttacgtg 798
Query: 301 acaatcggtttgagtgggatagttccaattgttactgggttttggaaatttggtgcatat 360
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 acattcggtttgagtgggatagttccaattgttactgggttttggaaatttggtgcatat 858
Query: 361 gaggccattcgcagagttcaattgaagtatgtkttgttagaagcgatgttctatattgcc 420
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 859 gaggccattcgcagagttcaattgaagtatgttttgttagaagcgatgttctatattgcc 918
Query: 421 ggtgcagtgatttacgggttcaggttcccagaagtgttagcgcctgggaaatttgatttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 919 ggtgcagtgatttacgggttcaggttcccagaagtgttagcgcctgggaaatttgatttc 978
Query: 481 gtcggacactcacatcaaatatttcatataatggtggttttaggctccatctgtcatttc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 979 gtcggacactcacatcaaatatttcatataatggtggttttaggctccatctgtcatttc 1038
Query: 541 agagccatcctcggatcttatgttttcatgcatactggtatgcatcactcgagctttgtc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1039 agagccatcctcggatcttatgttttcatgcatactggtatgcatcactcgagctttgtc 1098
Query: 601 ttcataagatgaagagatatgccaatactttatctcatatatcttaccattcttcttaca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1099 ttcataagatgaagagatatgccaatactttatctcatatatcttaccattcttcttaca 1158
Query: 661 agaaatttacacatgaactcatacataaatacagacacacgcgccacctttagaaagtaa 720
|||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||
Sbjct: 1159 agaaatttacacatgaactcatacataaatacagacacacgcgcaagcattagaaagtaa 1218
Query: 721 ccttaatgggacaatccatcaagtaccgcagatgttgctacactcggctgattgttggtt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1219 ccttaatgggacaatccatcaagtaccgcagatgttgctacactcggctgattgttggtt 1278
Query: 781 ccgtcgtttgttacattctctggcgacagtttactatattatgcagttttcttttttctt 840
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1279 ccgtcgtttgtaacattctctggcgacagtttactatattatgcagttttcttttttctt 1338
Query: 841 caatatgaacmaaaaaaaatatatatat 868
|||||||||| |||||||||||||||||
Sbjct: 1339 caatatgaacaaaaaaaaatatatatat 1366
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7107
Number of Sequences: 1807
Number of extensions: 7107
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 868
length of database: 10,358,551
effective HSP length: 16
effective length of query: 852
effective length of database: 10,329,639
effective search space: 8800852428
effective search space used: 8800852428
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)